Case Based Surveillance Implementation Guide
0.2.1 - ci-build
Case Based Surveillance Implementation Guide - Local Development build (v0.2.1). See the Directory of published versions
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<div xmlns="http://www.w3.org/1999/xhtml"><p><b>Generated Narrative</b></p><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Resource "HAICA-TC-Composition" </p><p style="margin-bottom: 0px">Profile: <a href="StructureDefinition-cbs-composition.html">Case Based Surveillance Composition Profile</a></p></div><p><b>status</b>: final</p><p><b>type</b>: Public health Case report <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://loinc.org/">LOINC</a>#55751-2)</span></p><p><b>date</b>: 2018-11-26</p><p><b>author</b>: <a href="#Organization_HAICA-TC-Reporting-Source">See above (Organization/HAICA-TC-Reporting-Source)</a></p><p><b>title</b>: Case Based Surveillance Composition</p></div>
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<date value="2018-11-26"/>
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<title value="Case Based Surveillance Composition"/>
<section>
<title value="Condition of Interest"/>
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<section>
<title value="Case Notification Panel"/>
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<title value="History of Encounters (Hospitalizations)"/>
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<title value="Reporting Entities"/>
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<section>
<title value="Laboratory Related Resources"/>
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<div xmlns="http://www.w3.org/1999/xhtml"><p><b>Generated Narrative</b></p><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Resource "HAICA-TC-Patient" </p><p style="margin-bottom: 0px">Profile: <a href="StructureDefinition-us-cbs-patient.html">US Case Based Surveillance Patient Profile</a></p></div><blockquote><p><b>US Core Race Extension</b></p><p><b>value</b>: White (Details: urn:oid:2.16.840.1.113883.6.238 code 2106-3 = 'White', stated as 'White')</p><p><b>value</b>: Mixed</p></blockquote><blockquote><p><b>US Core Ethnicity Extension</b></p><p><b>value</b>: Hispanic or Latino (Details: urn:oid:2.16.840.1.113883.6.238 code 2135-2 = 'Hispanic or Latino', stated as 'Hispanic or Latino')</p><p><b>value</b>: Hispanic or Latino</p></blockquote><p><b>US Core Birth Sex Extension</b>: F</p><p><b>Birth Place</b>: USA </p><p><b>genderIdentity</b>: female <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="http://hl7.org/fhir/R4/codesystem-gender-identity.html">Gender identity</a>#female)</span></p><p><b>identifier</b>: Local Record ID: C_auris_02, Local Subject ID: C_auris_PAT_02</p><p><b>name</b>: </p><p><b>telecom</b>: </p><p><b style="color: maroon">Exception generating Narrative: Cannot invoke "String.startsWith(String)" because the return value of "org.hl7.fhir.r5.model.ContactPoint.getValue()" is null</b></p></div>
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<valueString value="Hispanic or Latino"/>
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<country value="USA"/>
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<code value="female"/>
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<system value="urn:temp:national-reporting-jurisdiction:48"/>
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<gender value="female"/>
<birthDate value="1940-01-01"/>
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<district value="Cobb"/>
<state value="Georgia"/>
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<code value="Usual-Residence"/>
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<country value="USA"/>
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<fullUrl value="Condition/HAICA-TC-Condition"/>
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<id value="HAICA-TC-Condition"/>
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<div xmlns="http://www.w3.org/1999/xhtml"><p><b>Generated Narrative</b></p><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Resource "HAICA-TC-Condition" </p><p style="margin-bottom: 0px">Profile: <a href="StructureDefinition-us-cbs-condition.html">US Case Based Surveillance Condition of Interest Profile</a></p></div><p><b>Case Based Surveillance Case Class Status</b>: Confirmed present <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://browser.ihtsdotools.org/">SNOMED CT</a>#410605003)</span></p><p><b>category</b>: Problem List Item <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="http://terminology.hl7.org/3.0.0/CodeSystem-condition-category.html">Condition Category Codes</a>#problem-list-item)</span></p><p><b>code</b>: Candida auris, clinical <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (unknown#50263)</span></p><p><b>subject</b>: <a href="#Patient_HAICA-TC-Patient">See above (Patient/HAICA-TC-Patient: HAI-CA TC Example Patient)</a></p><p><b>onset</b>: 2018-11-22</p></div>
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<display value="Confirmed present"/>
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<code value="50263"/>
<display value="Candida auris, clinical"/>
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<subject>
<reference value="Patient/HAICA-TC-Patient"/>
<display value="HAI-CA TC Example Patient"/>
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<onsetDateTime value="2018-11-22"/>
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<fullUrl value="Encounter/HAICA-TC-Hospitalization"/>
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<Encounter>
<id value="HAICA-TC-Hospitalization"/>
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<text>
<status value="generated"/>
<div xmlns="http://www.w3.org/1999/xhtml"><p><b>Generated Narrative</b></p><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Resource "HAICA-TC-Hospitalization" </p><p style="margin-bottom: 0px">Profile: <a href="StructureDefinition-us-cbs-hospitalization.html">US Case Based Surveillance Hospitalization Encounter Profile</a></p></div><p><b>status</b>: unknown</p><p><b>class</b>: inpatient encounter (Details: http://terminology.hl7.org/CodeSystem/v3-ActCode code IMP = 'inpatient encounter', stated as 'inpatient encounter')</p><p><b>type</b>: Inpatient Hospital <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="http://terminology.hl7.org/3.0.0/CodeSystem-CPT.html">Current Procedural Terminology (CPT®)</a>#42628595)</span></p><p><b>subject</b>: <a href="#Patient_HAICA-TC-Patient">See above (Patient/HAICA-TC-Patient: HAI-CA TC Example Patient)</a></p><p><b>period</b>: 2018-11-24 --> (ongoing)</p><p><b>reasonReference</b>: <a href="#Condition_HAICA-TC-Condition">See above (Condition/HAICA-TC-Condition)</a></p><h3>Locations</h3><table class="grid"><tr><td>-</td><td><b>Location</b></td></tr><tr><td>*</td><td><span>: Masked Location</span></td></tr></table></div>
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<display value="HAI-CA TC Example Patient"/>
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<period>
<start value="2018-11-24"/>
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<reasonReference>
<reference value="Condition/HAICA-TC-Condition"/>
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<valueCode value="masked"/>
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<display value="Masked Location"/>
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<entry>
<fullUrl value="Organization/HAICA-TC-Reporting-Source"/>
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<Organization>
<id value="HAICA-TC-Reporting-Source"/>
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<text>
<status value="generated"/>
<div xmlns="http://www.w3.org/1999/xhtml"><p><b>Generated Narrative</b></p><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Resource "HAICA-TC-Reporting-Source" </p><p style="margin-bottom: 0px">Profile: <a href="StructureDefinition-us-cbs-reporting-source-organization.html">US Case Based Surveillance Reporting Source Organization Profile</a></p></div><p><b>active</b>: true</p><p><b>type</b>: Unknown <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="http://terminology.hl7.org/3.0.0/CodeSystem-v3-NullFlavor.html">NullFlavor</a>#UNK)</span></p><p><b>name</b>: Reporting Source</p><p><b>telecom</b>: -unknown-</p><p><b>address</b>: </p><h3>Contacts</h3><table class="grid"><tr><td>-</td><td><b>Name</b></td><td><b>Telecom</b></td></tr><tr><td>*</td><td>von Count, Count</td><td><a href="mailto:count_voncount@gadph.gov">count_voncount@gadph.gov</a></td></tr></table></div>
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<name value="Reporting Source"/>
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<valueCode value="unknown"/>
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<extension
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<valueCode value="unknown"/>
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<contact>
<name>
<text value="von Count, Count"/>
<family value="von Count"/>
<given value="Count"/>
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<telecom>
<system value="email"/>
<value value="count_voncount@gadph.gov"/>
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</contact>
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<fullUrl value="Observation/HAICA-TC-CNP"/>
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<id value="HAICA-TC-CNP"/>
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<text>
<status value="generated"/>
<div xmlns="http://www.w3.org/1999/xhtml"><p><b>Generated Narrative</b></p><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Resource "HAICA-TC-CNP" </p><p style="margin-bottom: 0px">Profile: <a href="StructureDefinition-cbs-case-notification-panel.html">Case Based Surveillance Case Notification Panel Profile</a></p></div><p><b>status</b>: final</p><p><b>category</b>: Case notification panel [CDC.PHIN] <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://loinc.org/">LOINC</a>#78000-7)</span></p><p><b>code</b>: Case notification panel [CDC.PHIN] <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://loinc.org/">LOINC</a>#78000-7)</span></p><p><b>subject</b>: <a href="#Patient_HAICA-TC-Patient">See above (Patient/HAICA-TC-Patient: HAICA-TC Example Patient)</a></p><p><b>hasMember</b>: </p><ul><li><a href="#Observation_HAICA-TC-MMWR">See above (Observation/HAICA-TC-MMWR)</a></li><li><a href="#Observation_HAICA-TC-CNP-Member1">See above (Observation/HAICA-TC-CNP-Member1)</a></li><li><a href="#Observation_HAICA-TC-CNP-Member2">See above (Observation/HAICA-TC-CNP-Member2)</a></li><li><a href="#Observation_HAICA-TC-CNP-Member3">See above (Observation/HAICA-TC-CNP-Member3)</a></li><li><a href="#Observation_HAICA-TC-CNP-Member4">See above (Observation/HAICA-TC-CNP-Member4)</a></li><li><a href="#Observation_HAICA-TC-CNP-Member5">See above (Observation/HAICA-TC-CNP-Member5)</a></li><li><a href="#Observation_HAICA-TC-CNP-Member6">See above (Observation/HAICA-TC-CNP-Member6)</a></li></ul></div>
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<status value="final"/>
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<coding>
<system value="http://loinc.org"/>
<code value="78000-7"/>
<display value="Case notification panel [CDC.PHIN]"/>
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<code>
<coding>
<system value="http://loinc.org"/>
<code value="78000-7"/>
<display value="Case notification panel [CDC.PHIN]"/>
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<subject>
<reference value="Patient/HAICA-TC-Patient"/>
<display value="HAICA-TC Example Patient"/>
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<hasMember>
<reference value="Observation/HAICA-TC-MMWR"/>
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<hasMember>
<reference value="Observation/HAICA-TC-CNP-Member1"/>
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<hasMember>
<reference value="Observation/HAICA-TC-CNP-Member2"/>
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<hasMember>
<reference value="Observation/HAICA-TC-CNP-Member3"/>
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<hasMember>
<reference value="Observation/HAICA-TC-CNP-Member4"/>
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<hasMember>
<reference value="Observation/HAICA-TC-CNP-Member5"/>
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<hasMember>
<reference value="Observation/HAICA-TC-CNP-Member6"/>
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<entry>
<fullUrl value="Observation/HAICA-TC-MMWR"/>
<resource>
<Observation>
<id value="HAICA-TC-MMWR"/>
<meta>
<profile
value="http://cbsig.chai.gatech.edu/StructureDefinition/cbs-mmwr"/>
</meta>
<text>
<status value="generated"/>
<div xmlns="http://www.w3.org/1999/xhtml"><p><b>Generated Narrative</b></p><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Resource "HAICA-TC-MMWR" </p><p style="margin-bottom: 0px">Profile: <a href="StructureDefinition-cbs-mmwr.html">Case Based Surveillance Morbidity and Mortality Weekly Report (MMWR) Elements</a></p></div><p><b>status</b>: final</p><p><b>category</b>: Case notification panel [CDC.PHIN] <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://loinc.org/">LOINC</a>#78000-7)</span></p><p><b>code</b>: MMWR Week/Year <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="CodeSystem-cbs-temp-code-system.html">Case Based Surveillance temporary/placeholder code system.</a>#MMWR)</span></p><p><b>subject</b>: <a href="#Patient_HAICA-TC-Patient">See above (Patient/HAICA-TC-Patient: HAI-CA TC Example Patient)</a></p><blockquote><p><b>component</b></p><p><b>code</b>: MMWR Week [CDC.PHIN] <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://loinc.org/">LOINC</a>#77991-8)</span></p><p><b>value</b>: 48</p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: MMWR Year [CDC.PHIN] <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://loinc.org/">LOINC</a>#77992-6)</span></p><p><b>value</b>: 2018</p></blockquote></div>
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<status value="final"/>
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<system value="http://loinc.org"/>
<code value="78000-7"/>
<display value="Case notification panel [CDC.PHIN]"/>
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<code>
<coding>
<system
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<code value="MMWR"/>
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<subject>
<reference value="Patient/HAICA-TC-Patient"/>
<display value="HAI-CA TC Example Patient"/>
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<component>
<code>
<coding>
<system value="http://loinc.org"/>
<code value="77991-8"/>
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<valueInteger value="48"/>
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<component>
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<coding>
<system value="http://loinc.org"/>
<code value="77992-6"/>
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<valueInteger value="2018"/>
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<entry>
<fullUrl value="Observation/HAICA-TC-CNP-Member1"/>
<resource>
<Observation>
<id value="HAICA-TC-CNP-Member1"/>
<meta>
<profile
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<text>
<status value="generated"/>
<div xmlns="http://www.w3.org/1999/xhtml"><p><b>Generated Narrative</b></p><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Resource "HAICA-TC-CNP-Member1" </p><p style="margin-bottom: 0px">Profile: <a href="StructureDefinition-cbs-reporting-state.html">Case Based Surveillance Reporting State</a></p></div><p><b>status</b>: final</p><p><b>category</b>: Case notification panel [CDC.PHIN] <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://loinc.org/">LOINC</a>#78000-7)</span></p><p><b>code</b>: Reporting State <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://loinc.org/">LOINC</a>#77966-0)</span></p><p><b>subject</b>: <a href="#Patient_HAICA-TC-Patient">See above (Patient/HAICA-TC-Patient: HAICA-TC Example Patient)</a></p><p><b>value</b>: Georgia <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (unknown#13)</span></p></div>
</text>
<status value="final"/>
<category>
<coding>
<system value="http://loinc.org"/>
<code value="78000-7"/>
<display value="Case notification panel [CDC.PHIN]"/>
</coding>
</category>
<code>
<coding>
<system value="http://loinc.org"/>
<code value="77966-0"/>
<display value="Reporting State"/>
</coding>
</code>
<subject>
<reference value="Patient/HAICA-TC-Patient"/>
<display value="HAICA-TC Example Patient"/>
</subject>
<valueCodeableConcept>
<coding>
<system value="urn:oid:2.16.840.1.113883.6.92"/>
<code value="13"/>
<display value="Georgia"/>
</coding>
</valueCodeableConcept>
</Observation>
</resource>
</entry>
<entry>
<fullUrl value="Observation/HAICA-TC-CNP-Member2"/>
<resource>
<Observation>
<id value="HAICA-TC-CNP-Member2"/>
<meta>
<profile
value="http://cbsig.chai.gatech.edu/StructureDefinition/cbs-reporting-county"/>
</meta>
<text>
<status value="generated"/>
<div xmlns="http://www.w3.org/1999/xhtml"><p><b>Generated Narrative</b></p><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Resource "HAICA-TC-CNP-Member2" </p><p style="margin-bottom: 0px">Profile: <a href="StructureDefinition-cbs-reporting-county.html">Case Based Surveillance Reporting County</a></p></div><p><b>status</b>: final</p><p><b>category</b>: Case notification panel [CDC.PHIN] <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://loinc.org/">LOINC</a>#78000-7)</span></p><p><b>code</b>: Reporting County <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://loinc.org/">LOINC</a>#77967-8)</span></p><p><b>subject</b>: <a href="#Patient_HAICA-TC-Patient">See above (Patient/HAICA-TC-Patient: HAICA-TC Example Patient)</a></p><p><b>value</b>: Cobb <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (unknown#13067)</span></p></div>
</text>
<status value="final"/>
<category>
<coding>
<system value="http://loinc.org"/>
<code value="78000-7"/>
<display value="Case notification panel [CDC.PHIN]"/>
</coding>
</category>
<code>
<coding>
<system value="http://loinc.org"/>
<code value="77967-8"/>
<display value="Reporting County"/>
</coding>
</code>
<subject>
<reference value="Patient/HAICA-TC-Patient"/>
<display value="HAICA-TC Example Patient"/>
</subject>
<valueCodeableConcept>
<coding>
<system value="urn:oid:2.16.840.1.113883.6.93"/>
<code value="13067"/>
<display value="Cobb"/>
</coding>
</valueCodeableConcept>
</Observation>
</resource>
</entry>
<entry>
<fullUrl value="Observation/HAICA-TC-CNP-Member3"/>
<resource>
<Observation>
<id value="HAICA-TC-CNP-Member3"/>
<meta>
<profile
value="http://cbsig.chai.gatech.edu/StructureDefinition/cbs-national-reporting-jurisdiction"/>
</meta>
<text>
<status value="generated"/>
<div xmlns="http://www.w3.org/1999/xhtml"><p><b>Generated Narrative</b></p><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Resource "HAICA-TC-CNP-Member3" </p><p style="margin-bottom: 0px">Profile: <a href="StructureDefinition-cbs-national-reporting-jurisdiction.html">Case Based Surveillance National Reporting Jurisdiction</a></p></div><p><b>status</b>: final</p><p><b>category</b>: Case notification panel [CDC.PHIN] <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://loinc.org/">LOINC</a>#78000-7)</span></p><p><b>code</b>: National Reporting Jurisdiction <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://loinc.org/">LOINC</a>#77968-6)</span></p><p><b>subject</b>: <a href="#Patient_HAICA-TC-Patient">See above (Patient/HAICA-TC-Patient: HAICA-TC Example Patient)</a></p><p><b>value</b>: Georgia <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (unknown#13)</span></p></div>
</text>
<status value="final"/>
<category>
<coding>
<system value="http://loinc.org"/>
<code value="78000-7"/>
<display value="Case notification panel [CDC.PHIN]"/>
</coding>
</category>
<code>
<coding>
<system value="http://loinc.org"/>
<code value="77968-6"/>
<display value="National Reporting Jurisdiction"/>
</coding>
</code>
<subject>
<reference value="Patient/HAICA-TC-Patient"/>
<display value="HAICA-TC Example Patient"/>
</subject>
<valueCodeableConcept>
<coding>
<system value="urn:oid:2.16.840.1.113883.6.92"/>
<code value="13"/>
<display value="Georgia"/>
</coding>
</valueCodeableConcept>
</Observation>
</resource>
</entry>
<entry>
<fullUrl value="Observation/HAICA-TC-CNP-Member4"/>
<resource>
<Observation>
<id value="HAICA-TC-CNP-Member4"/>
<meta>
<profile
value="http://cbsig.chai.gatech.edu/StructureDefinition/cbs-transmission-mode"/>
</meta>
<text>
<status value="generated"/>
<div xmlns="http://www.w3.org/1999/xhtml"><p><b>Generated Narrative</b></p><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Resource "HAICA-TC-CNP-Member4" </p><p style="margin-bottom: 0px">Profile: <a href="StructureDefinition-cbs-transmission-mode.html">Case Based Surveillance Transmission Mode</a></p></div><p><b>status</b>: final</p><p><b>category</b>: Case notification panel [CDC.PHIN] <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://loinc.org/">LOINC</a>#78000-7)</span></p><p><b>code</b>: Disease transmission mode <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://loinc.org/">LOINC</a>#77989-2)</span></p><p><b>subject</b>: <a href="#Patient_HAICA-TC-Patient">See above (Patient/HAICA-TC-Patient: HAICA-TC Example Patient)</a></p><p><b>value</b>: Indeterminate disease transmission mode <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://browser.ihtsdotools.org/">SNOMED CT</a>#418375005)</span></p></div>
</text>
<status value="final"/>
<category>
<coding>
<system value="http://loinc.org"/>
<code value="78000-7"/>
<display value="Case notification panel [CDC.PHIN]"/>
</coding>
</category>
<code>
<coding>
<system value="http://loinc.org"/>
<code value="77989-2"/>
<display value="Disease transmission mode"/>
</coding>
</code>
<subject>
<reference value="Patient/HAICA-TC-Patient"/>
<display value="HAICA-TC Example Patient"/>
</subject>
<valueCodeableConcept>
<coding>
<system value="http://snomed.info/sct"/>
<code value="418375005"/>
<display value="Indeterminate disease transmission mode"/>
</coding>
</valueCodeableConcept>
</Observation>
</resource>
</entry>
<entry>
<fullUrl value="Observation/HAICA-TC-CNP-Member5"/>
<resource>
<Observation>
<id value="HAICA-TC-CNP-Member5"/>
<meta>
<profile
value="http://cbsig.chai.gatech.edu/StructureDefinition/cbs-pregnancy-status"/>
</meta>
<text>
<status value="generated"/>
<div xmlns="http://www.w3.org/1999/xhtml"><p><b>Generated Narrative</b></p><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Resource "HAICA-TC-CNP-Member5" </p><p style="margin-bottom: 0px">Profile: <a href="StructureDefinition-cbs-pregnancy-status.html">Case Based Surveillance Pregnancy Status</a></p></div><p><b>status</b>: final</p><p><b>category</b>: Case notification panel [CDC.PHIN] <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://loinc.org/">LOINC</a>#78000-7)</span></p><p><b>code</b>: Pregnancy status at time of illness or condition <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://loinc.org/">LOINC</a>#77996-7)</span></p><p><b>subject</b>: <a href="#Patient_HAICA-TC-Patient">See above (Patient/HAICA-TC-Patient: HAICA-TC Example Patient)</a></p><p><b>value</b>: No <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="http://terminology.hl7.org/3.0.0/CodeSystem-v2-0532.html">expandedYes-NoIndicator</a>#N)</span></p></div>
</text>
<status value="final"/>
<category>
<coding>
<system value="http://loinc.org"/>
<code value="78000-7"/>
<display value="Case notification panel [CDC.PHIN]"/>
</coding>
</category>
<code>
<coding>
<system value="http://loinc.org"/>
<code value="77996-7"/>
<display value="Pregnancy status at time of illness or condition"/>
</coding>
</code>
<subject>
<reference value="Patient/HAICA-TC-Patient"/>
<display value="HAICA-TC Example Patient"/>
</subject>
<valueCodeableConcept>
<coding>
<system value="http://terminology.hl7.org/CodeSystem/v2-0532"/>
<code value="N"/>
</coding>
</valueCodeableConcept>
</Observation>
</resource>
</entry>
<entry>
<fullUrl value="Observation/HAICA-TC-CNP-Member6"/>
<resource>
<Observation>
<id value="HAICA-TC-CNP-Member6"/>
<meta>
<profile
value="http://cbsig.chai.gatech.edu/StructureDefinition/cbs-age-at-investigation"/>
</meta>
<text>
<status value="generated"/>
<div xmlns="http://www.w3.org/1999/xhtml"><p><b>Generated Narrative</b></p><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Resource "HAICA-TC-CNP-Member6" </p><p style="margin-bottom: 0px">Profile: <a href="StructureDefinition-cbs-age-at-investigation.html">Case Based Surveillance Age at Case Investigation</a></p></div><p><b>status</b>: final</p><p><b>category</b>: Case notification panel [CDC.PHIN] <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://loinc.org/">LOINC</a>#78000-7)</span></p><p><b>code</b>: Age at time of case investigation <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://loinc.org/">LOINC</a>#77998-3)</span></p><p><b>subject</b>: <a href="#Patient_HAICA-TC-Patient">See above (Patient/HAICA-TC-Patient: HAICA-TC Example Patient)</a></p><p><b>value</b>: 78 year<span style="background: LightGoldenRodYellow"> (Details: UCUM code a = 'a')</span></p></div>
</text>
<status value="final"/>
<category>
<coding>
<system value="http://loinc.org"/>
<code value="78000-7"/>
<display value="Case notification panel [CDC.PHIN]"/>
</coding>
</category>
<code>
<coding>
<system value="http://loinc.org"/>
<code value="77998-3"/>
<display value="Age at time of case investigation"/>
</coding>
</code>
<subject>
<reference value="Patient/HAICA-TC-Patient"/>
<display value="HAICA-TC Example Patient"/>
</subject>
<valueQuantity>
<value value="78"/>
<unit value="year"/>
<system value="http://unitsofmeasure.org"/>
<code value="a"/>
</valueQuantity>
</Observation>
</resource>
</entry>
<entry>
<fullUrl value="Specimen/HAICA-TC-Specimen"/>
<resource>
<Specimen>
<id value="HAICA-TC-Specimen"/>
<meta>
<profile
value="http://cbsig.chai.gatech.edu/StructureDefinition/cbs-specimen"/>
</meta>
<text>
<status value="generated"/>
<div xmlns="http://www.w3.org/1999/xhtml"><p><b>Generated Narrative</b></p><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Resource "HAICA-TC-Specimen" </p><p style="margin-bottom: 0px">Profile: <a href="StructureDefinition-cbs-specimen.html">Case Based Surveillance Specimen Profile</a></p></div><p><b>identifier</b>: State Lab Specimen ID: IDR908765140, Performing Laboratory Specimen ID: 198374-9</p><p><b>type</b>: Blood specimen <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://browser.ihtsdotools.org/">SNOMED CT</a>#119297000)</span></p><p><b>subject</b>: <a href="#Patient_HAICA-TC-Patient">See above (Patient/HAICA-TC-Patient: HAICA-TC Example Patient)</a></p><h3>Collections</h3><table class="grid"><tr><td>-</td><td><b>Collected[x]</b></td></tr><tr><td>*</td><td>2018-11-24</td></tr></table></div>
</text>
<identifier>
<type>
<coding>
<system value="urn:oid:2.16.840.1.114222.4.5.232"/>
<code value="PLT687"/>
<display value="State Lab Specimen ID"/>
</coding>
</type>
<value value="IDR908765140"/>
</identifier>
<identifier>
<type>
<coding>
<system value="urn:oid:2.16.840.1.114222.4.5.232"/>
<code value="LAB202"/>
<display value="Performing Laboratory Specimen ID"/>
</coding>
</type>
<value value="198374-9"/>
</identifier>
<type>
<coding>
<system value="http://snomed.info/sct"/>
<code value="119297000"/>
<display value="Blood specimen"/>
</coding>
</type>
<subject>
<reference value="Patient/HAICA-TC-Patient"/>
<display value="HAICA-TC Example Patient"/>
</subject>
<collection>
<collectedDateTime value="2018-11-24"/>
</collection>
</Specimen>
</resource>
</entry>
<entry>
<fullUrl value="DiagnosticReport/HAICA-TC-Lab-DiagnosticReport"/>
<resource>
<DiagnosticReport>
<id value="HAICA-TC-Lab-DiagnosticReport"/>
<meta>
<profile
value="http://cbsig.chai.gatech.edu/StructureDefinition/us-cbs-lab-diagnosticreport"/>
</meta>
<text>
<status value="generated"/>
<div xmlns="http://www.w3.org/1999/xhtml"><p><b>Generated Narrative</b></p><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Resource "HAICA-TC-Lab-DiagnosticReport" </p><p style="margin-bottom: 0px">Profile: <a href="StructureDefinition-us-cbs-lab-diagnosticreport.html">US Case Based Surveillance Lab Diagnostic Report</a></p></div><p><b>status</b>: final</p><p><b>category</b>: Laboratory <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="http://terminology.hl7.org/3.0.0/CodeSystem-v2-0074.html">diagnosticServiceSectionId</a>#LAB)</span></p><p><b>code</b>: Lab test method [Type] <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://loinc.org/">LOINC</a>#85069-3)</span></p><p><b>subject</b>: <a href="#Patient_HAICA-TC-Patient">See above (Patient/HAICA-TC-Patient)</a></p><p><b>issued</b>: Dec 31, 2020, 7:00:00 PM</p><p><b>specimen</b>: <a href="#Specimen_HAICA-TC-Specimen">See above (Specimen/HAICA-TC-Specimen)</a></p><p><b>result</b>: <a href="#Observation_HAICA-TC-Lab-Observation">See above (Observation/HAICA-TC-Lab-Observation)</a></p></div>
</text>
<status value="final"/>
<category>
<coding>
<system value="http://terminology.hl7.org/CodeSystem/v2-0074"/>
<code value="LAB"/>
</coding>
</category>
<code>
<coding>
<system value="http://loinc.org"/>
<code value="85069-3"/>
</coding>
</code>
<subject>
<reference value="Patient/HAICA-TC-Patient"/>
</subject>
<issued value="2021-01-01T00:00:00Z"/>
<specimen>
<reference value="Specimen/HAICA-TC-Specimen"/>
</specimen>
<result>
<reference value="Observation/HAICA-TC-Lab-Observation"/>
</result>
</DiagnosticReport>
</resource>
</entry>
<entry>
<fullUrl value="Observation/HAICA-TC-Lab-Observation"/>
<resource>
<Observation>
<id value="HAICA-TC-Lab-Observation"/>
<meta>
<profile
value="http://cbsig.chai.gatech.edu/StructureDefinition/us-cbs-lab-observation"/>
</meta>
<text>
<status value="generated"/>
<div xmlns="http://www.w3.org/1999/xhtml"><p><b>Generated Narrative</b></p><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Resource "HAICA-TC-Lab-Observation" </p><p style="margin-bottom: 0px">Profile: <a href="StructureDefinition-us-cbs-lab-observation.html">US Case Based Surveillance Lab Observation</a></p></div><p><b>status</b>: final</p><p><b>category</b>: Laboratory <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="http://terminology.hl7.org/3.0.0/CodeSystem-observation-category.html">Observation Category Codes</a>#laboratory)</span></p><p><b>code</b>: DNA Sequencing <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (unknown#LAB723)</span></p><p><b>subject</b>: <a href="#Patient_HAICA-TC-Patient">See above (Patient/HAICA-TC-Patient: HAICA-TC Example Patient)</a></p><p><b>value</b>: Positive <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://browser.ihtsdotools.org/">SNOMED CT</a>#10828004)</span></p><p><b>method</b>: D1/D2 <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> ([not stated]#D1D2)</span></p></div>
</text>
<status value="final"/>
<category>
<coding>
<system
value="http://terminology.hl7.org/CodeSystem/observation-category"/>
<code value="laboratory"/>
</coding>
</category>
<code>
<coding>
<system value="urn:oid:2.16.840.1.114222.4.5.232"/>
<code value="LAB723"/>
<display value="DNA Sequencing"/>
</coding>
</code>
<subject>
<reference value="Patient/HAICA-TC-Patient"/>
<display value="HAICA-TC Example Patient"/>
</subject>
<valueCodeableConcept>
<coding>
<system value="http://snomed.info/sct"/>
<code value="10828004"/>
<display value="Positive"/>
</coding>
</valueCodeableConcept>
<method>
<coding>
<code value="D1D2"/>
<display value="D1/D2"/>
</coding>
</method>
</Observation>
</resource>
</entry>
</Bundle>